Protein Information

Protein ZmHB11
ZmHB11 is a protein in the Homeobox family.
Information
TF Name:	ZmHB11
Species:	Maize
TF Family:	Homeobox
Gene Name(Synonym):	HB11
Uniprot ID:	B4FH59
Subgenome:	1

Overview of domains present in v5 transcripts
	PF00046	PF02183	PF04618
Zm00001eb314500_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d020670	DAPseq	sequence	fimo	position
Zm00001d020670	DAPseq	sequence	fimo	position
Zm00001d020670	ChIPseq	sequence	fimo	position
Zm00001d020670	PChIPseq	sequence	fimo	position

Zm00001eb314500_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MELALSLGETMADAGRDLMLGLGMGVGVRREEEAQRGRRDREVRRELEFTARSARSSPEPAVRLTLLHGLGLPWPPPPSS
ETNRHLEASARGFDVNRAPSLSAAGGAAEEDEEQDEAAAAAASSSPNNSASSFPTDFSAQGQVAPGADRACSRASDEDDG
GSARKKLRLSKEQSAFLEDSFKEHATLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEEN
RRLQKELSELRALKTVHPFYMHLPATTLSMCPSCERVASNSAPAPASSPSPATGIAAPAPEQRPSSFAALFSSPLNRPLA
AQAQPQPQAPANS

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF04618
PF00046
PF02183
PF02183
PF04618
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Nucleotide Sequence
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CCGATATATATACTCCACCAGTTGC...

GRMZM2G127537_T01 from maize genome v3

Related TFome: pUT3456

Amino Acid Sequence
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MELALSLGETMADAGRDLMLGLGMGVGVRREEEAQRGRRDREVRRELEFTARSARSSPEPAVRLTLLHGLGLPWPPPPSS
ETNRHLEASARGFDVNRAPSLSAAGGAAEEDEEQDEAAAAAASSSPNNSASSFPTDFSAQGQVAPGADRACSRASDEDDG
GSARKKLRLSKEQSAFLEDSFKEHATLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEEN
RRLQKELSELRALKTVHPFYMHLPATTLSMCPSCERVASNSAPAPASSPSPATGIAAPAPEQRPSSFAALFSSPLNRPLA
AQAQPQPQAPANS

Nucleotide Sequence
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CTGCGTCCAGCTCCCCCCACCCAGC...

Zm00001d020670_T001 from maize genome v4

Amino Acid Sequence
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MELALSLGETMADAGRDLMLGLGMGVGVRREEEAQRGRRDREVRRELEFTARSARSSPEPAVRLTLLHGLGLPWPPPPSS
ETNRHLEASARGFDVNRAPSLSAAGGAAEEDEEQDEAAAAAASSSPNNSASSFPTDFSAQGQVAPGADRACSRASDEDDG
GSARKKLRLSKEQSAFLEDSFKEHATLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEEN
RRLQKELSELRALKTVHPFYMHLPATTLSMCPSCERVASNSAPAPASSPSPATGIAAPAPEQRPSSFAALFSSPLNRPLA
AQAQPQPQAPANS

Nucleotide Sequence
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GGTTCCATTACTGGTCCCTAGCAGG...

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Protein ZmHB11

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmHB11 is the regulator

Interactions where ZmHB11 is the target
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Zm00001eb314500_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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GRMZM2G127537_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d020670_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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